STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptprcProtein tyrosine phosphatase receptor type C. (1230 aa)    
Predicted Functional Partners:
LOC103477886
Si:dkey-24p1.1.
   
 0.920
ENSPREP00000000253
Ig-like domain-containing protein.
    
  0.909
ENSPREP00000000283
Uncharacterized protein.
    
  0.903
LOC103478307
Si:dkey-33i11.1.
    
  0.903
ENSPREP00000020340
Uncharacterized protein.
    
  0.903
LOC103477977
Uncharacterized protein.
   
 0.781
LOC103474821
Uncharacterized protein.
   
 0.734
SEMA4D
Semaphorin 4D; Belongs to the semaphorin family.
    
 0.688
LOC103457799
Uncharacterized protein.
   
 0.679
LOC103459977
Sema domain-containing protein; Belongs to the semaphorin family.
    
 0.676
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.