STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103469458Nuclear receptor subfamily 1, group d, member 1. (523 aa)    
Predicted Functional Partners:
ncor2
Nuclear receptor corepressor 2.
    
 0.838
ncor1
Nuclear receptor corepressor 1.
    
 0.838
TADA1
Transcriptional adaptor 1.
    
 0.801
bhlhe41
Basic helix-loop-helix family, member e41.
   
  
 0.749
LOC103482295
Uncharacterized protein.
    
 0.717
gps2
G protein pathway suppressor 2.
    
 0.717
LOC103478869
Selenoprotein J.
    
 0.717
dbp
D site albumin promoter binding protein b.
   
 
 0.674
ENSPREP00000004470
Uncharacterized protein.
    
 0.615
LOC103472681
Circadian associated repressor of transcription a.
   
  
 0.612
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.