STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
peak1Pseudopodium-enriched atypical kinase 1. (1905 aa)    
Predicted Functional Partners:
ENSPREP00000015831
Uncharacterized protein.
     
 0.616
ENSPREP00000015870
Uncharacterized protein.
     
 0.616
ENSPREP00000015917
EH domain-containing protein.
     
 0.616
itsn2
Intersectin 2a.
     
 0.616
fam20a
FAM20A golgi associated secretory pathway pseudokinase.
      
 0.508
LOC103469368
Rho family GTPase 2.
     
 0.495
LOC103481273
Rho family GTPase 2.
     
 0.495
grb2
Growth factor receptor-bound protein 2b.
    
 0.438
ENSPREP00000007450
Uncharacterized protein.
     
 0.402
ENSPREP00000008107
Intersectin 1 (SH3 domain protein).
     
 0.402
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.