STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103460975Vestigial-like family member 4b. (294 aa)    
Predicted Functional Partners:
TEAD1
TEA domain family member 1b.
    
 
 0.742
yap1
Yes-associated protein 1.
    
 
 0.718
LOC103466248
TEA domain family member 1a.
    
 
 0.627
tead3
TEA domain family member 3 b.
    
 
 0.627
TEAD4
TEA domain transcription factor 4.
    
 
 0.627
LOC103467419
TEA domain transcription factor 3.
    
 
 0.627
irf2bp2
Interferon regulatory factor 2 binding protein 2.
    
 
 0.566
pim3
Serine/threonine-protein kinase; Proto-oncogene with serine/threonine kinase activity involved in cell survival and cell proliferation. Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. PIM subfamily.
      
 0.495
LOC103476184
Interferon regulatory factor 2 binding protein 1.
    
 
 0.482
LOC103470826
IRF-2BP1_2 domain-containing protein.
    
 
 0.482
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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