STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glaAlpha-galactosidase. (419 aa)    
Predicted Functional Partners:
glb1
Beta-galactosidase.
  
 
 0.938
LOC103461671
Galactosidase, beta 1-like; Belongs to the glycosyl hydrolase 35 family.
  
 
 0.938
LOC103466557
Beta-hexosaminidase.
   
 
 0.934
galc
Galactosylceramidase b.
     
 0.923
arsa
Arylsulfatase A.
   
 
 0.920
LOC103481270
Si:ch73-12o23.1; Belongs to the glycosyl hydrolase 31 family.
     
 0.917
gaa
Glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II); Belongs to the glycosyl hydrolase 31 family.
     
 0.917
si
Uncharacterized protein.
     
 0.917
neu1
Neuraminidase 1.
     
 0.916
ugt8
UDP glycosyltransferase 8; Belongs to the UDP-glycosyltransferase family.
   
 
 0.912
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.