STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000018724Uncharacterized protein. (624 aa)    
Predicted Functional Partners:
vcan
Versican a.
 
 
 
 0.897
LOC103472829
Uncharacterized protein.
 
      0.892
ENSPREP00000026548
C-type lectin domain-containing protein.
 
  
  0.848
ADAMTS5
ADAM metallopeptidase with thrombospondin type 1 motif 5.
     
 0.732
LOC103473495
Uncharacterized protein.
 
 
 
 0.565
ncan
Neurocan b.
   
0.547
agrn
Agrin.
     
 0.545
LOC103469607
Tenascin C.
   
 0.530
LOC103473322
Zmp:0000000846.
   
 0.530
tnn
Tenascin N.
   
  0.529
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.