STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103468316Phosphoribosyl pyrophosphate synthetase-associated protein 2. (357 aa)    
Predicted Functional Partners:
ENSPREP00000014189
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.769
bckdhb
Branched chain keto acid dehydrogenase E1 subunit beta.
   
 0.769
gart
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
  
  
 0.716
eprs1
Glutamyl-prolyl-tRNA synthetase.
  
 
 0.673
LOC103460982
Phosphoribosyl pyrophosphate synthetase 2.
  
0.672
prps1
Phosphoribosyl pyrophosphate synthetase 1B.
  
0.667
prps2
Pribosyltran_N domain-containing protein.
  
0.667
ENSPREP00000009662
PPC domain-containing protein.
  
  
 0.652
kars1
Lysine--tRNA ligase.
   
 
 0.644
dbt
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
   
 0.599
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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