STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tax1bp3Tax1 (human T-cell leukemia virus type I) binding protein 3. (138 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 
 0.727
rtkn
Rhotekin.
    
  0.602
LOC103476674
Rhotekin 2a.
    
  0.602
gas2l3
Growth arrest-specific 2 like 3.
      
 0.597
dnajc22
DnaJ (Hsp40) homolog, subfamily C, member 22.
      
 0.597
LOC103465321
Junction plakoglobin a.
   
 
 0.580
LOC103472282
Uncharacterized protein.
   
 
 0.580
ENSPREP00000030197
Hr1 domain-containing protein.
    
  0.524
tax1bp1
Tax1 (human T-cell leukemia virus type I) binding protein 1b.
      
 0.471
cdc27
Cell division cycle 27.
   
  
 0.471
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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