STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atf7ipActivating transcription factor 7 interacting protein. (958 aa)    
Predicted Functional Partners:
setdb1
SET domain bifurcated histone lysine methyltransferase 1b.
   
 0.897
LOC103457816
Uncharacterized protein.
   
 0.897
arl14ep
ADP-ribosylation factor-like 14 effector protein.
    
 
 0.823
LOC103467252
Double C2-like domains, delta.
      
 0.647
LOC103469185
Adhesion G protein-coupled receptor L3.1; Belongs to the G-protein coupled receptor 2 family.
      
 0.633
LOC103464342
Complement C1q C chain.
   
 0.533
sumo2
Small ubiquitin-related modifier.
    
 0.471
LOC103458735
Small ubiquitin-related modifier.
    
 0.471
LOC103461674
Ubiquitin-like domain-containing protein.
    
 0.471
LOC103467943
Small ubiquitin-related modifier.
    
 0.471
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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