STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xpo7Exportin 7. (1119 aa)    
Predicted Functional Partners:
LOC103477318
Exportin 1 (CRM1 homolog, yeast) b.
   
 
 0.720
papss1
3'-phosphoadenosine 5'-phosphosulfate synthase 1.
   
  
 0.693
xpot
Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.
      
 0.644
xpo1
Exportin 1 (CRM1 homolog, yeast) a.
   
 
 0.628
ranbp3
RAN binding protein 3b.
    
 
 0.620
xpo6
Exportin 6.
   
 
 0.618
xpo4
Exportin 4.
   
  
0.592
cse1l
CSE1 chromosome segregation 1-like (yeast).
      
 0.582
ipo5
Karyopherin (importin) beta 3.
      
 0.549
xpo5
Exportin 5.
   
 
 0.539
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.