STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000019028VWFA domain-containing protein. (612 aa)    
Predicted Functional Partners:
matn1
Matrilin 1.
 
 
 
0.631
ENSPREP00000033600
Uncharacterized protein.
  
  
  0.525
ENSPREP00000005771
Si:dkeyp-44a8.4.
  
     0.517
ENSPREP00000031340
annotation not available
  
     0.512
ENSPREP00000027401
Uncharacterized protein.
  
     0.495
LOC103464342
Complement C1q C chain.
  
 
0.461
ENSPREP00000013925
Uncharacterized protein.
  
     0.454
ENSPREP00000022184
Uncharacterized protein.
  
  0.449
LOC103464806
Matrilin 4.
 
 
 
0.434
tep1
Uncharacterized protein.
    
 0.427
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.