STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000019117PIPK domain-containing protein. (521 aa)    
Predicted Functional Partners:
LOC103473492
Talin 1.
    
 0.624
ENSPREP00000017779
FERM domain-containing protein.
    
 0.624
sec61g
SEC61 translocon gamma subunit.
   
 
 0.617
LOC103462596
Talin 2a.
    
 0.580
tln2
Talin 2b.
    
 0.580
tlnrd1
Talin rod domain containing 1.
    
 0.580
gpsm2
Uncharacterized protein.
    
 
 0.578
LOC103463079
Uncharacterized protein.
    
 
 0.578
farp2
FERM, RhoGEF and pleckstrin domain protein 2.
     
 0.522
rpl9
Ribosomal protein L9.
  
  
 0.443
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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