STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPDEFSAM pointed domain containing ETS transcription factor. (345 aa)    
Predicted Functional Partners:
gcnt3
Glucosaminyl (N-acetyl) transferase 3, mucin type.
      
 0.647
LOC103481773
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
   
  
 0.646
LOC103471920
Anterior gradient 2.
   
  
 0.619
GALNT3
Polypeptide N-acetylgalactosaminyltransferase.
   
  
 0.565
LOC103475380
Homeobox domain-containing protein.
      
 0.547
marcks
Myristoylated alanine-rich protein kinase C substrate a.
      
 0.532
tdp2
Tyrosyl-DNA phosphodiesterase 2b.
    
 
 0.506
LOC103470500
NK3 homeobox 1.
    
 
 0.491
tipin
TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.
      
 0.489
otp
Orthopedia homeobox.
      
 0.445
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.