STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103475526Glutamate receptor, metabotropic 5a. (1192 aa)    
Predicted Functional Partners:
LOC103463549
Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).
    
 0.930
LOC103470235
Uncharacterized protein.
    
 0.930
LOC103473464
Guanine nucleotide binding protein (G protein), alpha 14.
     
  0.906
LOC103473465
G protein subunit alpha q.
     
  0.906
LOC103470237
Guanine nucleotide binding protein (G protein), alpha 14a.
    
 0.757
LOC103463548
Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4.
     
  0.738
LOC103473462
Uncharacterized protein.
     
  0.674
LOC103473463
G protein subunit alpha 14.
     
  0.674
LOC103479257
WH1 domain-containing protein.
    
 0.625
LOC103470410
Homer scaffold protein 1b.
    
 0.592
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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