STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
skap1Src kinase associated phosphoprotein 1. (360 aa)    
Predicted Functional Partners:
FIG4
FIG4 phosphoinositide 5-phosphatase.
      
 0.583
ENSPREP00000005213
Uncharacterized protein.
   
 0.531
c8b
Complement component 8, beta polypeptide.
   
 0.531
LOC103478981
DAB adaptor protein 1b.
   
 0.531
ENSPREP00000030224
PID domain-containing protein.
   
 0.531
dab1
DAB adaptor protein 1a.
   
 0.531
ENSPREP00000033761
PID domain-containing protein.
   
 0.531
rassf5
Ras association domain family member 5.
      
 0.472
ENSPREP00000004786
AF4/FMR2 family, member 2.
      
 0.470
aff3
AF4/FMR2 family, member 3.
      
 0.470
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.