STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103459548Protein phosphatase 6, regulatory subunit 2a. (882 aa)    
Predicted Functional Partners:
LOC103474066
Serine/threonine-protein phosphatase.
    
 0.880
PPP6C
Serine/threonine-protein phosphatase.
    
 0.880
ppp4c
Serine/threonine-protein phosphatase.
    
 0.647
ankrd28
Ankyrin repeat domain 28b.
    
 0.635
LOC103472252
ANK_REP_REGION domain-containing protein.
    
 0.635
LOC103458342
Ankyrin repeat domain 66.
    
 0.635
ankrd44
Ankyrin repeat domain 44.
    
 0.635
ppp2ca
Serine/threonine-protein phosphatase.
   
 0.602
LOC103471193
Serine/threonine-protein phosphatase.
   
 0.602
ppp2cb
Serine/threonine-protein phosphatase.
   
 0.602
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.