STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103476782Uncharacterized protein. (1079 aa)    
Predicted Functional Partners:
ncf2
Neutrophil cytosolic factor 2.
   
 0.574
ENSPREP00000024849
Uncharacterized protein.
   
 0.574
sh3rf3
SH3 domain containing ring finger 3.
   
 0.545
ENSPREP00000000078
Sorbin and SH3 domain containing 2a.
   
 0.525
ENSPREP00000000143
Uncharacterized protein.
   
 0.525
ENSPREP00000003055
Sorbin and SH3 domain containing 1.
   
 0.525
LOC103480823
Uncharacterized protein.
   
 0.525
LOC103470529
Sorbin and SH3 domain containing 3.
   
 0.525
LOC103462573
Cytochrome b-245, alpha polypeptide.
    
 0.456
CDC42
Cell division cycle 42.
   
 0.436
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.