STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbxo47F-box domain-containing protein. (447 aa)    
Predicted Functional Partners:
clg11h1orf109
C19h1orf109 homolog (H. sapiens).
   
    0.593
fbxo48
F-box protein 48.
      
 0.586
fbxo42
F-box protein 42.
      
 0.560
ect2l
Coiled-coil domain containing 28A.
      
 0.549
LOC103478772
Calcium homeostasis modulator family member 5, tandem duplicate 2.
   
    0.544
LOC103478771
Calcium homeostasis modulator family member 6.
   
    0.544
LOC103468147
Proline rich Gla (G-carboxyglutamic acid) 2.
      
 0.534
rec8
REC8 meiotic recombination protein b.
   
  
 0.529
nosip
Nitric oxide synthase-interacting protein; Negatively regulates nitric oxide production by inducing nitric oxide synthase translocation to actin cytoskeleton and inhibiting its enzymatic activity; Belongs to the NOSIP family.
      
 0.528
rcn1
Reticulocalbin 1, EF-hand calcium binding domain.
      
 0.528
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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