STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103469438Uncharacterized protein. (330 aa)    
Predicted Functional Partners:
LOC103466225
Si:dkey-12e7.4; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.659
LOC103476445
Zgc:65997; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.659
tlcd1
TLC domain containing 1.
    
 
 0.650
rimbp2
RIMS binding protein 2.
      
 0.643
oxsm
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.497
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
   
 
 0.489
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
   
 
 0.489
sun2
SUN domain-containing protein.
    
 
 0.487
sun1
Sad1 and UNC84 domain containing 1.
    
 
 0.487
fdx1
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.484
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.