STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000019381Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (256 aa)    
Predicted Functional Partners:
LOC103462829
Kinesin family member 28.
 
      0.698
bap1
Ubiquitin carboxyl-terminal hydrolase.
    
 0.662
uchl5
Ubiquitin carboxyl-terminal hydrolase.
    
 0.662
ENSPREP00000019348
Uncharacterized protein.
 
      0.643
ogt
O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1.
    
 0.589
mbd5
Methyl-CpG binding domain protein 5.
   
 0.464
mysm1
Myb-like, SWIRM and MPN domains 1.
    
 0.446
ENSPREP00000018826
Fibronectin type-III domain-containing protein.
    
 0.440
Hcfc2
Host cell factor C2.
    
 0.440
LOC103465550
Host cell factor C1a.
    
 0.440
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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