STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdan1Codanin 1. (1330 aa)    
Predicted Functional Partners:
asf1b
Anti-silencing function 1Ba histone chaperone.
    
 
 0.596
LOC103468786
Anti-silencing function 1Ba histone chaperone.
    
 
 0.596
PRDM15
PR/SET domain 15.
   
    0.576
clg22h15orf41
Zgc:154061.
    
 
 0.566
wdfy3
WD repeat and FYVE domain containing 3.
      
 0.549
zwilch
Zwilch kinetochore protein.
      
 0.549
ipo4
Importin 4.
    
 
 0.476
il13ra1
Interleukin 13 receptor, alpha 2.
      
 0.468
LOC103478146
Si:dkey-71b5.7.
    
 
 0.453
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.