STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103479274RAR-related orphan receptor C b. (500 aa)    
Predicted Functional Partners:
LOC103466132
CD44 molecule (Indian blood group) b.
      
 0.681
uvrag
UV radiation resistance associated gene.
      
 0.676
npas4
Neuronal PAS domain protein 4a.
      
 0.646
ncor2
Nuclear receptor corepressor 2.
    
 0.586
ncor1
Nuclear receptor corepressor 1.
    
 0.586
nrip1
Nuclear receptor interacting protein 1b.
    
 0.564
LOC103458177
Sidoreflexin.
      
 0.550
TADA1
Transcriptional adaptor 1.
    
 0.532
LOC103463820
Neural retina leucine zipper.
   
  
 0.479
LOC103468951
Uncharacterized protein.
   
 0.444
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.