STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103469597Arrestin domain containing 1a. (457 aa)    
Predicted Functional Partners:
LOC103475974
Thioredoxin; Belongs to the thioredoxin family.
    
 0.598
LOC103475976
Thioredoxin; Belongs to the thioredoxin family.
    
 0.598
ENSPREP00000006378
Thioredoxin domain-containing protein.
    
 0.598
LOC103466144
Zgc:123278.
    
 
 0.485
tsg101
Tumor susceptibility 101a.
    
 
 0.485
ENSPREP00000014094
NDK domain-containing protein.
    
 0.471
wwp2
E3 ubiquitin-protein ligase.
    
 
 0.448
wwp1
WW domain containing E3 ubiquitin protein ligase 1.
    
 
 0.448
ENSPREP00000018176
Uncharacterized protein.
    
 0.448
ENSPREP00000021306
Si:dkeyp-44d3.5.
    
 0.448
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.