STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103474980FRAS1 related extracellular matrix 2b. (3114 aa)    
Predicted Functional Partners:
Fras1
Uncharacterized protein.
 
 
 0.965
frem1
Fras1 related extracellular matrix 1a.
  
0.940
itgb1
Integrin beta; Belongs to the integrin beta chain family.
    
 0.910
LOC103479472
Integrin beta; Belongs to the integrin beta chain family.
    
 0.910
itga8
Integrin, alpha 8; Belongs to the integrin alpha chain family.
     
 0.906
frem2
FRAS1 related extracellular matrix 2a.
  
  
 
0.901
npnt
Nephronectin a.
    
  0.815
LOC103480945
Uncharacterized protein.
     
  0.800
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.790
LOC103461037
RAN binding protein 2.
   
 
  0.577
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.