STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103479279Semaphorin 4e; Belongs to the semaphorin family. (759 aa)    
Predicted Functional Partners:
ptprc
Protein tyrosine phosphatase receptor type C.
    
 0.676
LOC103466876
Plexin b1a.
    
 0.638
ENSPREP00000019059
Sema domain-containing protein.
    
 0.638
plxnb2
Plexin b2b.
    
 0.638
LOC103465508
Plexin b1b.
    
0.638
PLXNB2
Plexin B2.
    
0.638
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.629
LOC103464537
Macrophage stimulating 1 receptor a.
    
 0.629
mst1r
Macrophage stimulating 1 receptor b.
    
 0.629
ENSPREP00000023646
Plexin_cytopl domain-containing protein.
    
 0.517
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.