STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000019657Uncharacterized protein. (253 aa)    
Predicted Functional Partners:
scg3
Secretogranin III.
   
  
 0.694
LOC103475296
Somatostatin.
   
  
 0.629
LOC103475119
Transforming growth factor beta; Belongs to the TGF-beta family.
      
 0.592
LOC103468167
Peptide YYa.
   
  
 0.557
scg2
Uncharacterized protein.
   
 
 0.551
LOC103479394
Secretogranin II (chromogranin C), b.
   
 
 0.551
cd79a
CD79a molecule, immunoglobulin-associated alpha.
      
 0.550
cpe
Carboxypeptidase E.
      
 0.541
slc2a2
Solute carrier family 2 member 2; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
      
 0.513
LOC103466283
Olfactomedin-like domain-containing protein.
      
 0.438
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.