STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103474983ADP-ribosylation factor interacting protein 2a. (338 aa)    
Predicted Functional Partners:
arl1
ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family.
    
 0.829
ENSPREP00000030890
Uncharacterized protein.
    
 0.773
LOC103475549
Tripartite motif containing 3b.
      
 0.636
LOC103474981
Tripartite motif containing 3a.
      
 0.636
LOC103474984
Dachsous cadherin-related 1a.
 
    
 0.633
fkbpl
FKBP prolyl isomerase like.
   
  
 0.571
trpc4
Transient receptor potential cation channel, subfamily C, member 4a; Belongs to the transient receptor (TC 1.A.4) family.
      
 0.560
LOC103474979
Transient receptor potential cation channel subfamily C member 4; Belongs to the transient receptor (TC 1.A.4) family.
      
 0.560
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
      
 0.560
ENSPREP00000016383
ADP-ribosylation factor 6b.
    
 0.545
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.