STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NR4A1Nuclear receptor subfamily 4 group A member 1. (591 aa)    
Predicted Functional Partners:
LOC103467778
Nuclear receptor subfamily 4, group A, member 1.
  
  
 
0.902
mapk7
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
  0.901
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 
 0.636
LOC103480607
Cytochrome P450, family 26, subfamily b, polypeptide 1; Belongs to the cytochrome P450 family.
      
 0.584
ncor2
Nuclear receptor corepressor 2.
    
 0.495
ncor1
Nuclear receptor corepressor 1.
    
 0.495
stra6
Stimulated by retinoic acid 6.
    
 
 0.463
TADA1
Transcriptional adaptor 1.
    
 0.455
LOC103482295
Uncharacterized protein.
    
 0.429
gps2
G protein pathway suppressor 2.
    
 0.429
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.