STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103474301Xin actin binding repeat containing 2a. (3310 aa)    
Predicted Functional Partners:
csrp3
Cysteine and glycine-rich protein 3 (cardiac LIM protein).
   
 
 0.628
wdr18
WD repeat domain 18.
   
 0.577
LOC103461533
Myosin, light chain 1, alkali; skeletal, fast.
   
 0.557
tex10
Testis expressed 10.
   
 0.548
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.519
LOC103474875
Hairy-related 13.
      
 0.473
LOC103477588
Hairy and enhancer of split related-7.
      
 0.473
GRXCR2
Glutaredoxin and cysteine rich domain containing 2.
     
 0.466
pjvk
Pejvakin.
     
 0.460
sptan1
Spectrin alpha, non-erythrocytic 1.
     
 0.439
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.