SOGA1 protein (Poecilia reticulata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

SOGA1

Suppressor of glucose, autophagy associated 1. (1888 aa)

Predicted Functional Partners:

ENSPREP00000029570

0.566

itfg1

0.549

mapre1

0.475

pcm1

0.401

LOC103457654

0.401

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000029570	SOGA1	ENSPREP00000029570	ENSPREP00000019871	Nucleolar protein 4-like b.	Suppressor of glucose, autophagy associated 1.	0.566
ENSPREP00000029570	mapre1	ENSPREP00000029570	ENSPREP00000002608	Nucleolar protein 4-like b.	Microtubule-associated protein, RP/EB family, member 1b.	0.474
LOC103457654	SOGA1	ENSPREP00000016092	ENSPREP00000019871	Lebercilin LCA5.	Suppressor of glucose, autophagy associated 1.	0.401
SOGA1	ENSPREP00000029570	ENSPREP00000019871	ENSPREP00000029570	Suppressor of glucose, autophagy associated 1.	Nucleolar protein 4-like b.	0.566
SOGA1	LOC103457654	ENSPREP00000019871	ENSPREP00000016092	Suppressor of glucose, autophagy associated 1.	Lebercilin LCA5.	0.401
SOGA1	itfg1	ENSPREP00000019871	ENSPREP00000005105	Suppressor of glucose, autophagy associated 1.	Integrin alpha FG-GAP repeat containing 1.	0.549
SOGA1	mapre1	ENSPREP00000019871	ENSPREP00000002608	Suppressor of glucose, autophagy associated 1.	Microtubule-associated protein, RP/EB family, member 1b.	0.475
SOGA1	pcm1	ENSPREP00000019871	ENSPREP00000000099	Suppressor of glucose, autophagy associated 1.	Pericentriolar material 1.	0.401
itfg1	SOGA1	ENSPREP00000005105	ENSPREP00000019871	Integrin alpha FG-GAP repeat containing 1.	Suppressor of glucose, autophagy associated 1.	0.549
mapre1	ENSPREP00000029570	ENSPREP00000002608	ENSPREP00000029570	Microtubule-associated protein, RP/EB family, member 1b.	Nucleolar protein 4-like b.	0.474
mapre1	SOGA1	ENSPREP00000002608	ENSPREP00000019871	Microtubule-associated protein, RP/EB family, member 1b.	Suppressor of glucose, autophagy associated 1.	0.475
pcm1	SOGA1	ENSPREP00000000099	ENSPREP00000019871	Pericentriolar material 1.	Suppressor of glucose, autophagy associated 1.	0.401