STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103460256Methyl-CpG binding domain protein 2. (302 aa)    
Predicted Functional Partners:
ENSPREP00000004470
Uncharacterized protein.
   
 0.835
rbbp4
Retinoblastoma binding protein 4.
   
 0.811
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.811
LOC103480197
GATA-type domain-containing protein.
   
 0.767
mta3
Metastasis associated 1 family, member 3.
   
 0.767
LOC103460987
Metastasis associated 1 family, member 2.
   
 0.767
mta1
Metastasis associated 1.
   
 0.767
LOC103463694
GATA zinc finger domain containing 2Ab.
   
 0.715
LOC103479433
Uncharacterized protein.
   
 0.715
gatad2b
GATA zinc finger domain containing 2B.
   
 0.715
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.