STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wdr91WD repeat domain 91. (619 aa)    
Predicted Functional Partners:
wdr81
WD repeat domain 81.
   
 
 0.960
ccdc93
Coiled-coil domain containing 93.
      
 0.549
ascc3
Activating signal cointegrator 1 complex subunit 3.
      
 0.545
vps18
VPS18 core subunit of CORVET and HOPS complexes.
      
 0.531
becn1
Beclin 1, autophagy related.
    
 
 0.526
ccz1
CCZ1 homolog, vacuolar protein trafficking and biogenesis associated.
      
 0.522
ccdc22
Coiled-coil domain containing 22.
      
 0.516
PRRC2B
Proline rich coiled-coil 2B.
      
 0.471
FIG4
FIG4 phosphoinositide 5-phosphatase.
      
 0.440
mfsd12
Major facilitator superfamily domain containing 12a.
      
 0.440
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.