STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103460259Uncharacterized protein. (850 aa)    
Predicted Functional Partners:
Clcf1
Cardiotrophin-like cytokine factor 1.
     
 0.922
LOC103470087
Uncharacterized protein.
     
 
0.900
il6st
Uncharacterized protein.
   
0.889
LOC103473535
Ciliary neurotrophic factor receptor.
    
 0.880
csf3r
Colony stimulating factor 3 receptor (granulocyte).
    
0.479
itgb8
Integrin beta; Belongs to the integrin beta chain family.
    
 0.466
Katnal2
Katanin p60 subunit A-like 2.
   
 0.455
ENSPREP00000020080
CSD domain-containing protein.
  
   
 0.453
LOC103474215
Synaptotagmin-like 2b.
  
     0.442
LOC103463628
Cytokine receptor-like factor 1b.
     
 0.437
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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