STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sec62SEC62 homolog, preprotein translocation factor. (411 aa)    
Predicted Functional Partners:
sec63
SEC63 homolog, protein translocation regulator.
   
 0.999
sec61g
SEC61 translocon gamma subunit.
    
 
 0.989
Sec61b
Uncharacterized protein.
    
 
 0.955
stk39
Serine threonine kinase 39.
    
 
 0.849
ENSPREP00000010734
Uncharacterized protein.
    
 
 0.849
LOC103456562
Oxidative stress responsive kinase 1b.
    
 
 0.849
LOC103479184
Protein kinase domain-containing protein.
    
 
 0.849
ENSPREP00000016126
Uncharacterized protein; Belongs to the SecY/SEC61-alpha family.
   
 
 0.784
LOC103465273
Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.
   
 
 0.784
ENSPREP00000017160
Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.
   
 
 0.784
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.