STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ncoa4Nuclear receptor coactivator 4. (561 aa)    
Predicted Functional Partners:
ENSPREP00000009332
Solute carrier family 30 member 5.
      
 0.477
JAZF1
JAZF zinc finger 1b.
      
 0.475
LOC103477784
Cannabinoid receptor 2; Belongs to the G-protein coupled receptor 1 family.
      
 0.475
sfpq
Splicing factor proline/glutamine-rich.
      
 0.475
ktn1
Kinectin 1.
      
 0.475
tmem86a
Transmembrane protein 86A.
      
 0.475
map2k5
Mitogen-activated protein kinase kinase 5; Belongs to the protein kinase superfamily.
      
 0.474
LOC103471990
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.474
LOC103469343
HEXIM P-TEFb complex subunit 1.
      
 0.473
ppp1r14b
Protein phosphatase 1, regulatory (inhibitor) subunit 14Bb.
      
 0.473
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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