STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
samd7Sterile alpha motif domain containing 7. (527 aa)    
Predicted Functional Partners:
prkci
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
 
 0.514
Skil
SKI-like proto-oncogene a.
   
  
 0.503
tnk2
Tyrosine kinase, non-receptor, 2b; Belongs to the protein kinase superfamily. Tyr protein kinase family.
      
 0.495
LOC103469004
Sterile alpha motif domain containing 14.
      
 0.471
mbtps1
Membrane-bound transcription factor peptidase, site 1.
     
 0.462
LOC103464149
Uncharacterized protein.
  
 
  0.457
LOC103478412
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
  0.446
LOC103463647
Forkhead box Q2.
   
 0.445
LOC103476852
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a.
    
 
 0.444
opn1sw
G_PROTEIN_RECEP_F1_2 domain-containing protein.
     
 0.442
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.