STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000020363GATA-type domain-containing protein. (318 aa)    
Predicted Functional Partners:
LOC103465732
Structural maintenance of chromosomes protein.
   
 0.530
Mos
V-mos Moloney murine sarcoma viral oncogene homolog; Belongs to the protein kinase superfamily.
   
 
 0.526
crebbp
CREB binding protein b.
    
 0.520
foxa2
Forkhead box A2.
   
 0.518
foxa1
Fork-head domain-containing protein.
   
 0.518
ENSPREP00000028065
Forkhead box A3.
   
 0.518
tbpl2
Uncharacterized protein.
   
 0.502
tbp
TATA box binding protein.
   
 0.502
LOC103481886
Uncharacterized protein.
   
 0.502
LOC103464091
CREB binding protein a.
    
 0.498
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.