STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Znf518bUncharacterized protein. (811 aa)    
Predicted Functional Partners:
WDR1
WD repeat domain 1.
      
 0.549
LOC103478148
Interleukin 6 receptor.
  
  
  0.528
mdc1
Uncharacterized protein.
  
 
  0.500
pbxip1
Pre-B-cell leukemia homeobox interacting protein 1b.
  
  0.496
LOC103475432
Uncharacterized protein.
  
 
  0.492
mlip
Uncharacterized protein.
  
     0.486
LOC103478303
Ig-like domain-containing protein.
  
  
  0.473
LOC103463874
Cadherin 24, type 2a; Cadherins are calcium-dependent cell adhesion proteins.
  
  
  0.473
gnpnat1
Glucosamine 6-phosphate N-acetyltransferase.
    
 
 0.472
bdp1
SANT domain-containing protein.
  
 
 0.461
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.