STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctps1CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. (588 aa)    
Predicted Functional Partners:
LOC103482172
Nucleoside diphosphate kinase.
  
 
 0.950
LOC103469013
NDK domain-containing protein; Belongs to the NDK family.
  
 
 0.950
nme3
Nucleoside diphosphate kinase.
  
 
 0.950
LOC103469155
Nucleoside diphosphate kinase.
  
 
 0.950
nme7
Nucleoside diphosphate kinase 7; Belongs to the NDK family.
  
 
 0.950
nme6
Nucleoside diphosphate kinase.
  
 
 0.950
nudt2
Nudix (nucleoside diphosphate linked moiety X)-type motif 2.
  
 
 0.950
entpd1
Ectonucleoside triphosphate diphosphohydrolase 1; Belongs to the GDA1/CD39 NTPase family.
     
 0.930
LOC103478359
Ectonucleoside triphosphate diphosphohydrolase 3; Belongs to the GDA1/CD39 NTPase family.
     
 0.930
eprs1
Glutamyl-prolyl-tRNA synthetase.
  
 
 0.927
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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