STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grik5Glutamate receptor, ionotropic, kainate 5. (957 aa)    
Predicted Functional Partners:
GRIK3
Glutamate ionotropic receptor kainate type subunit 3.
  
 
0.622
LOC103474988
Glutamate receptor, ionotropic, kainate 1b.
  
 
0.620
LOC103475531
Glutamate receptor, ionotropic, kainate 1a.
  
 
0.619
GRIK2
Glutamate ionotropic receptor kainate type subunit 2.
  
 
0.619
LOC103457461
Uncharacterized protein.
  
 
0.617
nol9
Nucleolar protein 9.
      
 0.470
RNF207
Ring finger protein 207a.
      
 0.468
LOC103467258
Hairy-related 12.
      
 0.467
LOC103468320
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 
 0.400
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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