STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbc1d31TBC1 domain family, member 31. (1060 aa)    
Predicted Functional Partners:
ENSPREP00000015831
Uncharacterized protein.
     
 0.945
ENSPREP00000015870
Uncharacterized protein.
     
 0.945
ENSPREP00000015917
EH domain-containing protein.
     
 0.945
itsn2
Intersectin 2a.
     
 0.945
dctn2
Dynactin 2 (p50).
    
 0.826
rab3gap1
RAB3 GTPase activating protein subunit 1.
   
 
 0.752
nol10
Nucleolar protein 10.
      
 0.681
rab5if
RAB5 interacting factor.
      
 0.681
zhx2
Zinc fingers and homeoboxes 2a.
 
  
 
 0.680
nudcd2
NudC domain containing 2.
   
 0.674
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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