STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000020826DIX domain-containing protein. (54 aa)    
Predicted Functional Partners:
LOC103456513
Uncharacterized protein.
   
 0.963
LOC103469222
Axin 2 (conductin, axil).
   
 0.963
axin1
Axin 1.
   
 0.963
LOC103467721
Prickle homolog 3.
    
 0.958
PRICKLE1
Prickle homolog 1a.
    
 0.958
LOC103459444
Prickle homolog 1b.
    
 0.958
LOC103467536
Prickle homolog 2a.
    
 0.958
prickle2
Prickle homolog 2b.
    
 0.958
VANGL2
VANGL planar cell polarity protein 2.
    
 0.956
VANGL1
Vang-like protein.
    
 0.956
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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