STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000020872Uncharacterized protein. (76 aa)    
Predicted Functional Partners:
gps1
G protein pathway suppressor 1.
   
 0.999
cops2
COP9 signalosome subunit 2.
   
 0.999
cops4
COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).
   
 0.999
cops3
COP9 signalosome subunit 3.
   
 0.999
COPS6
COP9 signalosome subunit 6.
   
 0.997
cops5
COP9 signalosome subunit 5.
   
 0.994
cops7a
COP9 constitutive photomorphogenic homolog subunit 7A.
    
 0.985
ppp1r42
Protein phosphatase 1, regulatory subunit 42.
   
 0.979
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
   
 0.936
cul2
Cullin 2; Belongs to the cullin family.
   
 0.929
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.