STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC35D3Solute carrier family 35 member D3. (440 aa)    
Predicted Functional Partners:
LOC103460857
PNKD metallo-beta-lactamase domain containing.
      
 0.760
mysm1
Myb-like, SWIRM and MPN domains 1.
   
 
 0.689
slc30a4
Solute carrier family 30 member 4.
   
  
 0.560
larp6
La ribonucleoprotein domain family, member 6a.
      
 0.549
slc35b4
Solute carrier family 35 member B4.
   
  
 0.540
allc
Allantoicase.
   
  
 0.507
slc35b3
Solute carrier family 35 member B3.
   
  
 0.483
Slc35b2
Solute carrier family 35 member B2.
   
  
 0.481
Sec61b
Uncharacterized protein.
      
 0.477
stx7
Syntaxin 7-like; Belongs to the syntaxin family.
    
 
 0.474
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.