STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103479821Clusterin; Belongs to the clusterin family. (464 aa)    
Predicted Functional Partners:
LOC103467179
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
    0.733
LOC103482020
Retinol binding protein 3.
   
  
 0.665
Rbp3
Interphotoreceptor retinoid-binding protein like.
   
  
 0.665
LOC103460179
Uncharacterized protein.
      
 0.643
LOC103465548
Opsin 1 (cone pigments), short-wave-sensitive 2.
   
    0.590
LOC103465549
Opsin 1 (cone pigments), short-wave-sensitive 2.
   
    0.590
guca1a
Guanylate cyclase activator 1A.
   
    0.548
LOC103462501
Complement component c3b, tandem duplicate 2.
   
 
 0.547
xrcc6
X-ray repair complementing defective repair in Chinese hamster cells 6.
    
 
 0.506
LOC103465755
Hydroxysteroid (17-beta) dehydrogenase 12a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.475
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.