STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103457094Uncharacterized protein. (238 aa)    
Predicted Functional Partners:
hey1
Hes-related family bHLH transcription factor with YRPW motif 1.
  
  
 
0.905
HEY1
Hes related family bHLH transcription factor with YRPW motif 1.
  
  
 
0.905
bola1
BolA family member 1; Belongs to the BolA/IbaG family.
      
 0.549
nr2f2
Nuclear receptor subfamily 2, group F, member 2.
    
 
 0.535
ano8
Anoctamin.
      
 0.471
dll4
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
    
 0.459
LOC103458504
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
    
 0.459
LOC103473440
Notch receptor 1a.
    
 0.433
notch1
Notch receptor 1b.
    
 0.433
Nr2f1
Nuclear receptor subfamily 2, group F, member 1a.
    
 
 0.417
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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