STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000021062RRM domain-containing protein. (259 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.721
LOC103473466
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.583
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.583
eprs1
Glutamyl-prolyl-tRNA synthetase.
   
 
 0.538
ENSPREP00000027744
TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.518
ewsr1
EWS RNA-binding protein 1b.
   
 0.518
YBX2
Y-box binding protein 2.
   
 0.505
ybx1
Y box binding protein 1.
   
 0.505
ENSPREP00000008610
RRM domain-containing protein.
   
 0.498
tra2b
Transformer 2 beta homolog.
   
 0.498
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.