STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asic4Acid-sensing (proton-gated) ion channel family member 4a; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (489 aa)    
Predicted Functional Partners:
stoml1
Stomatin (EPB72)-like 1.
    
 0.565
gak
Cyclin G associated kinase.
      
 0.543
slc12a3
Solute carrier family 12 member 3.
      
 0.443
prlr
Prolactin receptor; This is a receptor for the anterior pituitary hormone prolactin; Belongs to the type I cytokine receptor family. Type 1 subfamily.
      
 0.439
pth1r
Parathyroid hormone 1 receptor a; Belongs to the G-protein coupled receptor 2 family.
      
 0.420
LOC103481804
Parathyroid hormone 1 receptor b; Belongs to the G-protein coupled receptor 2 family.
      
 0.420
LOC103456598
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
 0.415
LOC103473276
Sodium/potassium-transporting ATPase subunit alpha.
   
  
 0.411
rhag
Rh associated glycoprotein; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily.
      
 0.407
LOC103477611
Rh family, B glycoprotein (gene/pseudogene); Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily.
      
 0.407
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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