STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcyt1bPhosphate cytidylyltransferase 1, choline, beta a. (386 aa)    
Predicted Functional Partners:
chkb
Choline kinase beta.
     
 0.979
chpt1
Choline phosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.975
LOC103466273
Choline kinase alpha.
     
 0.961
LOC103464802
Choline/ethanolamine phosphotransferase 1b; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.954
pcyt1a
Phosphate cytidylyltransferase 1, choline, alpha a.
  
  
 
0.928
Phospho1
Phosphatase, orphan 1.
     
 0.912
ENSPREP00000033037
Uncharacterized protein.
     
 0.912
LOC103475428
Phosphate cytidylyltransferase 1, choline, beta b.
  
  
 
0.901
smpd3
Sphingomyelin phosphodiesterase 3, neutral.
      
 0.636
smpd2
Sphingomyelin phosphodiesterase 2b, neutral membrane (neutral sphingomyelinase).
      
 0.636
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.