STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000021283t-SNARE coiled-coil homology domain-containing protein. (318 aa)    
Predicted Functional Partners:
LOC103469646
Syntaxin binding protein 1b; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.827
LOC103473957
Syntaxin binding protein 1a; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.827
ENSPREP00000004746
V-SNARE coiled-coil homology domain-containing protein.
    
 0.738
snap23
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.735
ENSPREP00000009573
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.725
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.725
ykt6
YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family.
    
 0.720
LOC103472577
Uncharacterized protein.
   
 
 0.711
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.711
stxbp2
Syntaxin binding protein 2; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.700
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (28%) [HD]